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My WorkSphere: Integrative work environment for grid-unaware biomedical researchers and applications
(2006)
In order to deliver cyberinfrastructure to the general scientific and biomedical research
community, transparent access and ease of use are of critical importance. Applications in systematic
modeling of biological processes ...
The Java CoG kit experiment manager
(2006)
In this paper, we introduced a framework for experiment
management that simplifies the users’ interaction
with grid environments by managing a large
number of tasks to be conducted as part of the experiment
by the individual ...
Grid portals for bioinformatics
(Grid Computing Environments (GCE), 2006)
The explosive growth of biological and biomedical research requires a new set of software tools and a computational environment that includes high performance computing and largescale data management. These software ...
A high productivity/low maintenance approach to high-performance computation for biomedicine: four case studies
(American Medical Informatics Association: Journal of the American Medical Informatics Association, 2005-01)
The rapid advances in high-throughput biotechnologies such as DNA microarrays and mass spectrometry have generated vast amounts of data ranging from gene expression to proteomics data. The large size and complexity involved ...
The microarray revolution
(Elsevier: Biochemistry and Molecular Biology Education, 2004-07)
In recent years, microarray analysis has become a key experimental tool, enabling the analysis of genome-wide patterns of gene expression. This review approaches the microarray revolution with a focus upon four topics: 1) ...